Index

A

accumulate() (pipeline.perf_data.EpochManager method) accumulate_preds() (pipeline.perf_data.ClassificationPerfData method) (pipeline.perf_data.HybridPerfData method) (pipeline.perf_data.KFoldClassificationPerfData method) (pipeline.perf_data.KFoldRegressionPerfData method) (pipeline.perf_data.PerfData method) (pipeline.perf_data.RegressionPerfData method) (pipeline.perf_data.SimpleClassificationPerfData method) (pipeline.perf_data.SimpleHybridPerfData method) (pipeline.perf_data.SimpleRegressionPerfData method) add_classification_column() (in module utils.curate_data) add_mol_column() (in module utils.rdkit_easy)

add_to_parser() (pipeline.parameter_parser.AutoArgumentAdder method) aggregate_assay_data() (in module utils.curate_data) all_auto_arguments() (in module pipeline.parameter_parser) all_auto_float_lists() (in module pipeline.parameter_parser) all_auto_int_lists() (in module pipeline.parameter_parser) all_auto_lists() (in module pipeline.parameter_parser) all_prefixed_names() (pipeline.parameter_parser.AutoArgumentAdder method) already_run() (utils.hyperparam_search_wrapper.HyperparameterSearch method) assemble_layers() (utils.hyperparam_search_wrapper.HyperparameterSearch method) atom_curation() (in module utils.data_curation_functions) atom_curation_excape() (in module utils.data_curation_functions) AutoArgumentAdder (class in pipeline.parameter_parser) average_and_remove_duplicates() (in module utils.curate_data)

B

base_feature_importance() (in module pipeline.feature_importance) base_mol_from_inchi() (in module utils.struct_utils) base_mol_from_smiles() (in module utils.struct_utils) base_smiles_from_inchi() (in module utils.struct_utils) base_smiles_from_smiles() (in module utils.struct_utils) build_dataset_name() (in module pipeline.model_pipeline)

build_hyperopt_search_domain() (in module utils.hyperparam_search_wrapper) build_jobs() (utils.hyperparam_search_wrapper.HyperparameterSearch method) build_search() (in module utils.hyperparam_search_wrapper) build_tarball_name() (in module pipeline.model_pipeline) bulk_export_kv_for_files() (in module utils.datastore_functions) bulk_update_kv() (in module utils.datastore_functions)

C

calc_AD_kmean_dist() (in module pipeline.model_pipeline) calc_AD_kmean_local_density() (in module pipeline.model_pipeline) calc_dist_diskdataset() (in module pipeline.chem_diversity) calc_dist_feat_array() (in module pipeline.chem_diversity) calc_dist_smiles() (in module pipeline.chem_diversity) calc_summary() (in module pipeline.chem_diversity) calc_train_dset_pair_dis() (pipeline.model_pipeline.ModelPipeline method) calculate_descriptors() (in module utils.rdkit_easy) canonical_tautomers_from_smiles() (in module utils.struct_utils) check_key_val() (in module utils.datastore_functions) check_version_compatible() (in module utils.model_version_utils) ClassificationPerfData (class in pipeline.perf_data) cluster_dataframe() (in module utils.rdkit_easy) cluster_fingerprints() (in module utils.rdkit_easy) cluster_permutation_importance() (in module pipeline.feature_importance) compute() (pipeline.perf_data.EpochManager method) (pipeline.perf_data.EpochManagerKFold method) compute_negative_log_responses() (in module utils.data_curation_functions)

compute_perf_metrics() (pipeline.perf_data.HybridPerfData method) (pipeline.perf_data.KFoldClassificationPerfData method) (pipeline.perf_data.KFoldRegressionPerfData method) (pipeline.perf_data.PerfData method) (pipeline.perf_data.RegressionPerfData method) (pipeline.perf_data.SimpleClassificationPerfData method) (pipeline.perf_data.SimpleHybridPerfData method) (pipeline.perf_data.SimpleRegressionPerfData method) config_client() (in module utils.datastore_functions) convert_IC50_to_pIC50() (in module utils.data_curation_functions) convert_metadata() (in module pipeline.model_tracker) copy_best_filesystem_models() (in module pipeline.compare_models) copy_datasets_to_bucket() (in module utils.datastore_functions) create_model_metadata() (pipeline.model_pipeline.ModelPipeline method) create_new_rows_for_extra_results() (in module utils.curate_data) create_perf_data() (in module pipeline.perf_data) create_prediction_metadata() (pipeline.model_pipeline.ModelPipeline method) create_prediction_pipeline() (in module pipeline.model_pipeline) create_prediction_pipeline_from_file() (in module pipeline.model_pipeline)

D

dataset_key_exists() (in module utils.datastore_functions) DatastoreInsertionException del_ignored_params() (in module pipeline.compare_models) dict_to_list() (in module pipeline.parameter_parser) display_feature_clusters() (in module pipeline.feature_importance) dist_hist_plot() (utils.compare_splits_plots.SplitStats method) dist_hist_train_v_test_plot() (utils.compare_splits_plots.SplitStats method) dist_hist_train_v_valid_plot() (utils.compare_splits_plots.SplitStats method)

diversity_plots() (in module pipeline.diversity_plots) down_select() (in module utils.data_curation_functions) download_activitytype() (in module utils.pubchem_utils) download_bioactivity_assay() (in module utils.pubchem_utils) download_dose_response_from_bioactivity() (in module utils.pubchem_utils) download_SID_from_bioactivity_assay() (in module utils.pubchem_utils) download_smiles() (in module utils.pubchem_utils) draw_structure() (in module utils.struct_utils)

E

ensemble_predict() (in module pipeline.model_pipeline) EpochManager (class in pipeline.perf_data) EpochManagerKFold (class in pipeline.perf_data) exclude_organometallics() (in module utils.data_curation_functions) export_model() (in module pipeline.model_tracker)

extract_collection_perf_metrics() (in module pipeline.compare_models) extract_datastore_model_tarball() (in module pipeline.model_tracker) extract_featurizer_params() (in module pipeline.parameter_parser) extract_model_and_feature_parameters() (in module pipeline.compare_models) extract_model_params() (in module pipeline.parameter_parser) extract_params() (pipeline.parameter_parser.AutoArgumentAdder method)

F

filter_datasets_interactive() (in module utils.datastore_functions) filter_dtc_data() (in module utils.data_curation_functions) filter_in_by_column_values() (in module utils.curate_data) filter_in_out_by_column_values() (in module utils.curate_data) filter_jobs() (utils.hyperparam_search_wrapper.HyperparameterSearch method)

filter_out_by_column_values() (in module utils.curate_data) filter_out_comments() (in module utils.curate_data) fix_moe_smiles() (in module utils.struct_utils) flatten_dict() (in module pipeline.parameter_parser) freq_table() (in module utils.curate_data)

G

gen_maestro_command() (in module utils.hyperparam_search_wrapper) generate_assay_list() (utils.hyperparam_search_wrapper.GeometricSearch method) (utils.hyperparam_search_wrapper.GridSearch method) (utils.hyperparam_search_wrapper.HyperparameterSearch method) (utils.hyperparam_search_wrapper.RandomSearch method) (utils.hyperparam_search_wrapper.UserSpecifiedSearch method) generate_combo() (utils.hyperparam_search_wrapper.GeometricSearch method) (utils.hyperparam_search_wrapper.GridSearch method) (utils.hyperparam_search_wrapper.HyperparameterSearch method) (utils.hyperparam_search_wrapper.RandomSearch method) (utils.hyperparam_search_wrapper.UserSpecifiedSearch method) generate_combos() (utils.hyperparam_search_wrapper.HyperparameterSearch method) generate_maestro_commands() (utils.hyperparam_search_wrapper.HyperparameterSearch method) generate_param_combos() (utils.hyperparam_search_wrapper.GeometricSearch method) (utils.hyperparam_search_wrapper.GridSearch method) (utils.hyperparam_search_wrapper.HyperparameterSearch method) (utils.hyperparam_search_wrapper.RandomSearch method) (utils.hyperparam_search_wrapper.UserSpecifiedSearch method) generate_searches() (utils.hyperparam_search_wrapper.HyperparameterSearch method) generate_split_shortlist() (utils.hyperparam_search_wrapper.HyperparameterSearch method) generate_split_shortlist_file() (utils.hyperparam_search_wrapper.HyperparameterSearch method) GeometricSearch (class in utils.hyperparam_search_wrapper) get_ampl_version() (in module utils.model_version_utils) get_ampl_version_from_dir() (in module utils.model_version_utils) get_ampl_version_from_json() (in module utils.model_version_utils) get_ampl_version_from_model() (in module utils.model_version_utils) get_best_models_info() (in module pipeline.compare_models) get_best_perf_table() (in module pipeline.compare_models) get_collection_datasets() (in module pipeline.compare_models) get_dataset_key() (utils.model_file_reader.ModelFileReader method) get_dataset_metadata() (utils.hyperparam_search_wrapper.HyperparameterSearch method) get_dataset_models() (in module pipeline.compare_models) get_descriptor_type() (utils.model_file_reader.ModelFileReader method) get_featurizer() (utils.model_file_reader.ModelFileReader method) get_filesystem_models() (in module pipeline.compare_models) get_filesystem_perf_results() (in module pipeline.compare_models) get_full_metadata() (in module pipeline.model_tracker) get_full_metadata_by_uuid() (in module pipeline.model_tracker) get_id_col() (utils.model_file_reader.ModelFileReader method) get_key_val() (in module utils.datastore_functions) get_keyval() (in module utils.datastore_functions) get_list_args() (pipeline.parameter_parser.AutoArgumentAdder method) get_list_float_args() (pipeline.parameter_parser.AutoArgumentAdder method) get_list_int_args() (pipeline.parameter_parser.AutoArgumentAdder method) get_major_version() (in module utils.model_version_utils) get_metadata_by_uuid() (in module pipeline.model_tracker) get_metrics() (pipeline.model_pipeline.ModelPipeline method) get_model_collection_by_uuid() (in module pipeline.model_tracker) get_model_info() (utils.model_file_reader.ModelFileReader method) get_model_parameters() (utils.model_file_reader.ModelFileReader method) get_model_training_data_by_uuid() (in module pipeline.model_tracker) get_model_type() (utils.model_file_reader.ModelFileReader method) get_model_uuid() (utils.model_file_reader.ModelFileReader method)

get_multiple_models_metadata() (in module utils.model_file_reader) get_multitask_perf_from_files() (in module pipeline.compare_models) get_multitask_perf_from_files_new() (in module pipeline.compare_models) get_multitask_perf_from_tracker() (in module pipeline.compare_models) get_num_params() (in module utils.hyperparam_search_wrapper) get_parser() (in module pipeline.parameter_parser) get_pred_values() (pipeline.perf_data.ClassificationPerfData method) (pipeline.perf_data.HybridPerfData method) (pipeline.perf_data.KFoldClassificationPerfData method) (pipeline.perf_data.KFoldRegressionPerfData method) (pipeline.perf_data.PerfData method) (pipeline.perf_data.RegressionPerfData method) (pipeline.perf_data.SimpleClassificationPerfData method) (pipeline.perf_data.SimpleHybridPerfData method) (pipeline.perf_data.SimpleRegressionPerfData method) get_prediction_results() (pipeline.perf_data.ClassificationPerfData method) (pipeline.perf_data.HybridPerfData method) (pipeline.perf_data.PerfData method) (pipeline.perf_data.RegressionPerfData method) get_rdkit_smiles() (in module utils.struct_utils) get_rdkit_smiles_parent() (in module utils.curate_data) get_real_values() (pipeline.perf_data.KFoldClassificationPerfData method) (pipeline.perf_data.KFoldRegressionPerfData method) (pipeline.perf_data.PerfData method) (pipeline.perf_data.SimpleClassificationPerfData method) (pipeline.perf_data.SimpleHybridPerfData method) (pipeline.perf_data.SimpleRegressionPerfData method) get_response_cols() (utils.model_file_reader.ModelFileReader method) get_score_types() (in module pipeline.hyper_perf_plots) get_shortlist_df() (utils.hyperparam_search_wrapper.HyperparameterSearch method) get_smiles_4dtc_data() (in module utils.data_curation_functions) get_smiles_col() (utils.model_file_reader.ModelFileReader method) get_smiles_dtc_data() (in module utils.data_curation_functions) get_smiles_excape_data() (in module utils.data_curation_functions) get_split_csv() (utils.model_file_reader.ModelFileReader method) get_split_labeled_dataset() (in module utils.split_response_dist_plots) get_split_strategy() (utils.model_file_reader.ModelFileReader method) get_split_uuid() (utils.model_file_reader.ModelFileReader method) get_splitter() (utils.model_file_reader.ModelFileReader method) get_splitting_parameters() (utils.model_file_reader.ModelFileReader method) get_summary_metadata_table() (in module pipeline.compare_models) get_summary_perf_tables() (in module pipeline.compare_models) get_tarball_perf_table() (in module pipeline.compare_models) get_training_dataset() (utils.model_file_reader.ModelFileReader method) get_training_datasets() (in module pipeline.compare_models) get_training_perf_table() (in module pipeline.compare_models) get_version() (utils.model_file_reader.ModelFileReader method) get_weights() (pipeline.perf_data.KFoldClassificationPerfData method) (pipeline.perf_data.KFoldRegressionPerfData method) (pipeline.perf_data.PerfData method) (pipeline.perf_data.SimpleClassificationPerfData method) (pipeline.perf_data.SimpleHybridPerfData method) (pipeline.perf_data.SimpleRegressionPerfData method) GridSearch (class in utils.hyperparam_search_wrapper)

H

has_nans() (in module utils.many_to_one) HybridPerfData (class in pipeline.perf_data)

HyperOptSearch (class in utils.hyperparam_search_wrapper) HyperparameterSearch (class in utils.hyperparam_search_wrapper)

I

ic50topic50() (in module utils.data_curation_functions) initialize_model_tracker() (in module utils.datastore_functions) is_list() (in module pipeline.parameter_parser)

is_list_float() (in module pipeline.parameter_parser) is_list_int() (in module pipeline.parameter_parser) is_organometallic() (in module utils.data_curation_functions) is_primative_type() (in module pipeline.parameter_parser)

K

kekulize_smiles() (in module utils.struct_utils) key_exists() (in module utils.datastore_functions)

KFoldClassificationPerfData (class in pipeline.perf_data) KFoldRegressionPerfData (class in pipeline.perf_data)

L

labeled_freq_table() (in module utils.curate_data) list_defaults() (in module pipeline.parameter_parser)

list_key_values() (in module utils.datastore_functions) load_featurize_data() (pipeline.model_pipeline.ModelPipeline method) load_from_tracker() (in module pipeline.model_pipeline)

M

main() (in module pipeline.model_pipeline) (in module pipeline.parameter_parser) (in module utils.hyperparam_search_wrapper) (in module utils.model_file_reader) (in module utils.model_retrain) (in module utils.model_version_utils) make_all_plots() (utils.compare_splits_plots.SplitStats method) make_dataset_key_absolute() (in module pipeline.parameter_parser) many_to_one() (in module utils.many_to_one) many_to_one_df() (in module utils.many_to_one) ManyToOneException matching_atoms_and_bonds() (in module utils.rdkit_easy) mcs() (in module pipeline.dist_metrics) mle_censored_mean() (in module utils.curate_data) MLMTClientInstantiationException model_choice_score() (pipeline.perf_data.ClassificationPerfData method) (pipeline.perf_data.HybridPerfData method) (pipeline.perf_data.RegressionPerfData method) ModelFileReader (class in utils.model_file_reader) ModelPipeline (class in pipeline.model_pipeline) module pipeline pipeline.chem_diversity pipeline.compare_models pipeline.dist_metrics pipeline.diversity_plots pipeline.feature_importance pipeline.hyper_perf_plots pipeline.model_pipeline pipeline.model_tracker pipeline.parameter_parser pipeline.perf_data pipeline.perf_plots pipeline.predict_from_model utils utils.compare_splits_plots utils.curate_data utils.data_curation_functions utils.datastore_functions utils.hyperparam_search_wrapper utils.many_to_one utils.model_file_reader utils.model_retrain utils.model_version_utils utils.pubchem_utils utils.rdkit_easy utils.split_response_dist_plots utils.struct_utils

mol_to_html() (in module utils.rdkit_easy) mol_to_pil() (in module utils.rdkit_easy) mol_to_svg() (in module utils.rdkit_easy) mol_wt_from_smiles() (in module utils.struct_utils) mols_from_smiles() (in module utils.struct_utils)

N

NANCompoundIDException NANSMILESException

negative_predictive_value() (in module pipeline.perf_data) no_nan_ids_or_smiles() (in module utils.many_to_one) num_trainable_parameters_from_file() (in module pipeline.compare_models)

O

on_new_best_valid() (pipeline.perf_data.EpochManager method)

P

parse_args() (in module utils.compare_splits_plots) parse_command_line() (in module pipeline.parameter_parser) parse_config_file() (in module pipeline.parameter_parser) parse_namespace() (in module pipeline.parameter_parser) parse_params() (in module utils.hyperparam_search_wrapper) PerfData (class in pipeline.perf_data) permutate_NNlayer_combo_params() (in module utils.hyperparam_search_wrapper) permutation_feature_importance() (in module pipeline.feature_importance) pipeline module pipeline.chem_diversity module pipeline.compare_models module pipeline.dist_metrics module pipeline.diversity_plots module pipeline.feature_importance module pipeline.hyper_perf_plots module pipeline.model_pipeline module pipeline.model_tracker module pipeline.parameter_parser module pipeline.perf_data module pipeline.perf_plots module

pipeline.predict_from_model module plot_dataset_dist_distr() (in module pipeline.diversity_plots) plot_feature_importances() (in module pipeline.feature_importance) plot_nn_perf() (in module pipeline.hyper_perf_plots) plot_perf_vs_epoch() (in module pipeline.perf_plots) plot_prec_recall_curve() (in module pipeline.perf_plots) plot_pred_vs_actual() (in module pipeline.perf_plots) plot_pred_vs_actual_from_df() (in module pipeline.perf_plots) plot_pred_vs_actual_from_file() (in module pipeline.perf_plots) plot_rf_nn_xg_perf() (in module pipeline.hyper_perf_plots) plot_rf_perf() (in module pipeline.hyper_perf_plots) plot_ROC_curve() (in module pipeline.perf_plots) plot_split_perf() (in module pipeline.hyper_perf_plots) plot_split_subset_response_distrs() (in module utils.split_response_dist_plots) plot_tani_dist_distr() (in module pipeline.diversity_plots) plot_train_valid_test_scores() (in module pipeline.hyper_perf_plots) plot_umap_feature_projections() (in module pipeline.perf_plots) plot_umap_train_set_neighbors() (in module pipeline.perf_plots) plot_xg_perf() (in module pipeline.hyper_perf_plots) postprocess_args() (in module pipeline.parameter_parser) predict_embedding() (pipeline.model_pipeline.ModelPipeline method) predict_from_model_file() (in module pipeline.predict_from_model) predict_from_tracker_model() (in module pipeline.predict_from_model) predict_full_dataset() (pipeline.model_pipeline.ModelPipeline method) predict_on_dataframe() (pipeline.model_pipeline.ModelPipeline method) predict_on_smiles() (pipeline.model_pipeline.ModelPipeline method) primative_type_only() (in module pipeline.parameter_parser) print_stats() (utils.compare_splits_plots.SplitStats method) prune_defaults() (in module pipeline.parameter_parser)

R

RandomSearch (class in utils.hyperparam_search_wrapper) rdkit_smiles_from_smiles() (in module utils.struct_utils) reformat_filter_dict() (in module utils.hyperparam_search_wrapper) regenerate_results() (in module pipeline.model_pipeline) RegressionPerfData (class in pipeline.perf_data) remove_outlier_replicates() (in module utils.curate_data) remove_unrecognized_arguments() (in module pipeline.parameter_parser) repeat_defined_search() (in module utils.datastore_functions) replicate_rmsd() (in module utils.curate_data) retrain_model() (in module pipeline.model_pipeline) retrieve_bucket_names() (in module utils.datastore_functions) retrieve_columns_from_dataset() (in module utils.datastore_functions)

retrieve_dataset_by_dataset_oid() (in module utils.datastore_functions) retrieve_dataset_by_datasetkey() (in module utils.datastore_functions) retrieve_keys() (in module utils.datastore_functions) retrieve_values_for_key() (in module utils.datastore_functions) return_split_uuid() (utils.hyperparam_search_wrapper.HyperparameterSearch method) return_split_uuid_file() (utils.hyperparam_search_wrapper.HyperparameterSearch method) rms_error() (in module pipeline.perf_data) run_cmd() (in module utils.hyperparam_search_wrapper) run_command() (in module utils.hyperparam_search_wrapper) run_models() (in module pipeline.model_pipeline) run_predictions() (pipeline.model_pipeline.ModelPipeline method) run_search() (utils.hyperparam_search_wrapper.HyperOptSearch method) (utils.hyperparam_search_wrapper.HyperparameterSearch method)

S

save_figure() (in module utils.compare_splits_plots) save_metrics() (pipeline.model_pipeline.ModelPipeline method) save_model() (in module pipeline.model_tracker) save_model_metadata() (pipeline.model_pipeline.ModelPipeline method) save_model_tarball() (in module pipeline.model_tracker) save_png() (in module utils.rdkit_easy) save_svg() (in module utils.rdkit_easy) search_datasets_by_key_value() (in module utils.datastore_functions) search_files_interactive() (in module utils.datastore_functions) set_data_root() (in module utils.data_curation_functions) set_group_permissions() (in module utils.curate_data) set_make_pred() (pipeline.perf_data.EpochManager method) setup_notebook() (in module utils.rdkit_easy) should_stop() (pipeline.perf_data.EpochManager method) show_df() (in module utils.rdkit_easy) show_html() (in module utils.rdkit_easy) SimpleClassificationPerfData (class in pipeline.perf_data) SimpleHybridPerfData (class in pipeline.perf_data)

SimpleRegressionPerfData (class in pipeline.perf_data) smiles_to_inchi_key() (in module utils.struct_utils) split() (in module utils.compare_splits_plots) split_and_save_dataset() (utils.hyperparam_search_wrapper.GeometricSearch method) (utils.hyperparam_search_wrapper.GridSearch method) (utils.hyperparam_search_wrapper.HyperparameterSearch method) (utils.hyperparam_search_wrapper.RandomSearch method) (utils.hyperparam_search_wrapper.UserSpecifiedSearch method) split_dataset() (pipeline.model_pipeline.ModelPipeline method) SplitStats (class in utils.compare_splits_plots) standardize_relations() (in module utils.data_curation_functions) string_to_dict() (in module utils.datastore_functions) string_to_list() (in module utils.datastore_functions) strip_optional() (in module pipeline.parameter_parser) submit_jobs() (utils.hyperparam_search_wrapper.HyperparameterSearch method) subset_frac_plot() (utils.compare_splits_plots.SplitStats method) summarize_data() (in module utils.curate_data) summarize_datasets() (in module utils.datastore_functions)

T

tanimoto() (in module pipeline.dist_metrics) tanimoto_single() (in module pipeline.dist_metrics) to_str() (in module pipeline.parameter_parser) train_model() (in module utils.model_retrain) (pipeline.model_pipeline.ModelPipeline method)

train_model_from_tar() (in module utils.model_retrain) train_model_from_tracker() (in module utils.model_retrain) train_models_from_dataset_keys() (in module utils.model_retrain)

U

umap_plot() (utils.compare_splits_plots.SplitStats method) update() (pipeline.perf_data.EpochManager method) update_distribution_kv() (in module utils.datastore_functions) update_epoch() (pipeline.perf_data.EpochManager method) update_kv() (in module utils.datastore_functions) update_valid() (pipeline.perf_data.EpochManager method) upload_df_dtc_base_smiles_all() (in module utils.data_curation_functions) upload_df_dtc_mleqonly() (in module utils.data_curation_functions) upload_df_dtc_mleqonly_class() (in module utils.data_curation_functions) upload_df_dtc_smiles() (in module utils.data_curation_functions) upload_df_dtc_smiles_regr_all_class() (in module utils.data_curation_functions) upload_df_excape_mleqonly() (in module utils.data_curation_functions) upload_df_excape_mleqonly_class() (in module utils.data_curation_functions) upload_df_excape_smiles() (in module utils.data_curation_functions) upload_df_to_DS() (in module utils.datastore_functions) upload_distmatrix_to_DS() (in module pipeline.chem_diversity) upload_file_dtc_raw_data() (in module utils.data_curation_functions) upload_file_dtc_smiles_regr_all() (in module utils.data_curation_functions) upload_file_excape_raw_data() (in module utils.data_curation_functions) upload_file_to_DS() (in module utils.datastore_functions) upload_pickle_to_DS() (in module utils.datastore_functions) UserSpecifiedSearch (class in utils.hyperparam_search_wrapper) utils module utils.compare_splits_plots module

utils.curate_data module utils.data_curation_functions module utils.datastore_functions module utils.hyperparam_search_wrapper module utils.many_to_one module utils.model_file_reader module utils.model_retrain module utils.model_version_utils module utils.pubchem_utils module utils.rdkit_easy module utils.split_response_dist_plots module utils.struct_utils module

V

validate_version() (in module utils.model_version_utils)

W

wrapper() (in module pipeline.parameter_parser)

X

xc50topxc50_for_nm() (in module utils.curate_data)